Tak coauthors new genetic modelling paper with Frank Rheindt’s lab

A new paper led by Tang Qian and  Frank Rheindt from the Avian Evolution Lab at NUS, with Tak Fung as a co-author, has just been published in Molecular Ecology Resources.

The paper describes how they developed a new R package called ResDisMapper, which helps in the management of biological invasions and habitat degradation by allowing users to generate a map showing resistance to dispersal over a landscape, as defined using genetic data. The R package is novel because there are few programs available that map resistance to dispersal over the relatively short spatiotemporal scales required for the management of biological invasions and habitat degradation.

They tested ResDisMapper against two other programs (DResD and EEMS) using a suite of simulated datasets and found that overall, it performed substantially better. They further demonstrated the utility of ResDisMapper by applying it to genetic data collected for rock pigeons (Columbia livia) in Singapore and Golden-crowned sifakas (Propithecus tattersalli) in northern Madagascar, to identify regions with high and low resistance to dispersal.

Tang, Q., T. Fung, and F. E. Rheindt. 2020. ResDisMapper: An R package for fine-scale mapping of resistance to dispersal. Molecular Ecology Resources

Fig1

Resistance map produced by ResDismapper for rock pigeons in Singapore, with annotations describing the meaning of the different colours and contours. A significant barrier/corridor refers to areas with resistance values that are higher/lower than those from a null distribution with high probability, and lie within the red/green contours. Areas that lie inside the blue contours have resistance values with high probability of being positive or negative (high “certainty”). The yellow circles indicate sampling points.